BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023E09SP1|AL428072
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1205 1624 0.0
3x_Contig1572 184 3e-46
>3x_Contig1205
Length = 5507
Score = 1624 bits (812), Expect = 0.0
Identities = 821/828 (99%)
Strand = Plus / Plus
Query: 1 gatcatgaaaaggaaaagagcagaacgacaattaccacgtaaatgcaagaatgggtatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4680 gatcatgaaaaggaaaagagcagaacgacaattaccacgtaaatgcaagaatgggtatgg 4739
Query: 61 taatagatacaaaattaatgggaagattaggaatggttcaattagatgggaaaacaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4740 taatagatacaaaattaatgggaagattaggaatggttcaattagatgggaaaacaagtc 4799
Query: 121 caattttcgtttttttattcgtttctgaatagaataatagattaaaggaatagaaacgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4800 caattttcgtttttttattcgtttctgaatagaataatagattaaaggaatagaaacgat 4859
Query: 181 aacgaatggtaataaaggcaggtaaatcgaatttaaacaagaaaaacaaaaacaaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4860 aacgaatggtaataaaggcaggtaaatcgaatttaaacaagaaaaacaaaaacaaaacaa 4919
Query: 241 cgaataggagatggagtaggtttaaagagtaatattcttagtgggaaaggtaactttagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4920 cgaataggagatggagtaggtttaaagagtaatattcttagtgggaaaggtaactttagc 4979
Query: 301 gtagaaaaacaatctatcaaaattaaagttcagaggttcaatctttgaggaatcctccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4980 gtagaaaaacaatctatcaaaattaaagttcagaggttcaatctttgaggaatcctccaa 5039
Query: 361 cttcggcataccaaaagatccattcatctagaaaggccttgaacatccaccacaatccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5040 cttcggcataccaaaagatccattcatctagaaaggccttgaacatccaccacaatccaa 5099
Query: 421 aattttcgtttgagttcgttaatatttctttcgtacaagcagcggtgaaagaattgaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5100 aattttcgtttgagttcgttaatatttctttcgtacaagcagcggtgaaagaattgaaag 5159
Query: 481 tcaatactagtaatctaggaggtagactcttgtttgaaagcactccgaaaaccattttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5160 tcaatactagtaatctaggaggtagactcttgtttgaaagcactccgaaaaccattttaa 5219
Query: 541 cgaaagagattagatcaaaatcctcatccgttttcttaagaagttccaataactgcactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5220 cgaaagagattagatcaaaatcctcatccgttttcttaagaagttccaataactgcactg 5279
Query: 601 aaaagagttcttgcatatctttttctaaagcagggtggttgaagtaagaaaactcttggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5280 aaaagagttcttgcatatctttttctaaagcagggtggttgaagtaagaaaactcttggt 5339
Query: 661 ttattagttcggacactttaacgttctgttcccagacgtataacattgataatctattct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5340 ttattagttcggacactttaacgttctgttcccagacgtataacattgataatctattct 5399
Query: 721 cttgcttactcatgatatttgataatttcttgctgttgtcaatcmctttcmcgagccttt 780
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 5400 cttgcttactcatgatatttgataatttcttgctgttgtcaatcactttcacgagccttt 5459
Query: 781 tcmcaagacggcaaaacgcctgtgccmcacycyttttgaaggttacca 828
|| ||||||||||||||||||||||| ||| | |||||| ||||||||
Sbjct: 5460 tcacaagacggcaaaacgcctgtgccacactctttttgacggttacca 5507
>3x_Contig1572
Length = 12810
Score = 184 bits (92), Expect = 3e-46
Identities = 104/110 (94%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 864 atcttcatatacycmtttgaaaagtctgacaatttgttgaacmca-ccyctggaatttcg 922
|||||||||||| | ||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 12810 atcttcatatactcatttgaaaagtctgacaatttgttgaacacaacctctggaatttcg 12751
Query: 923 ttgaagtcaacaatcaaacycgaaagcatcttggtcagagccttgtgagt 972
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12750 ttgaagtcaacaatcaaactcgaaagcatcttggtcagagccttgtgagt 12701
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8547
Number of Sequences: 1807
Number of extensions: 8547
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 2
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)